Light Sheet Microscopy

MBF Bioscience > Light Sheet Microscopy

 

Revolutionize Your Research with Advanced Light Sheet Microscopy Solutions

 

Light sheet microscopy represents a revolutionary breakthrough in biological imaging, enabling researchers to visualize entire organs and tissues in unprecedented detail. As a fluorescence imaging technique, light sheet microscopy utilizes a sheet of laser light to illuminate only a thin slice of the sample while detection occurs perpendicular to the illumination axis. This orthogonal arrangement provides intrinsic 3D optical sectioning, dramatically reducing photobleaching while capturing stunning 3D images of cleared tissue specimens.

 

What is Light Sheet Microscopy?

 

Light sheet microscopy (also known as selective plane illumination microscopy or SPIM) is a cutting-edge imaging technique that uses a thin sheet of laser light to illuminate samples typically from the side, as with the SLICE light sheet microscope, or from specific theta angles from top, as with the ClearScope microscope, while detection occurs from above. The basic technical principle is a wide-field fluorescence microscope, placed perpendicular to the light-sheet, that collects the fluorescence signal through a full-frame camera.

 

This innovative approach offers several remarkable advantages for researchers studying cleared tissues:

 

  • Superior Image Quality: Light sheet microscopy eliminates out-of-focus blur, providing crisp, high-resolution images throughout large specimens
  • Reduced Photobleaching: By illuminating only the focal plane, light sheet microscopy minimizes photodamage to sensitive fluorescent samples – drastically reducing overall photobleaching effects and phototoxicity
  • Rapid Acquisition: Capture entire organs in minutes rather than hours compared to traditional confocal microscopy – featuring drastically reduced overall acquisition duration
  • Deep Tissue Penetration: Image through millimeters of cleared tissue while maintaining cellular resolution
  • Live Cell Imaging Capability: Light sheet microscopy enables live-cell imaging with precise tracking of dynamic cellular and molecular events

 

Light Sheet Microscopy vs Traditional Methods

 

Unlike confocal and spinning disc microscopy, light sheet microscopy’s orthogonal arrangement decouples illumination from detection, enabling:

 

  • Excellent signal-to-noise ratio
  • High temporal and 3D-spatial resolution
  • Gentle bio-imaging for extended time-lapse studies
  • Wide field of view with increased contrast
  • Faster image acquisition speeds by several orders of magnitude

Advanced Light Sheet Imaging Systems

SLICE– Revolutionary Projected Light Sheet Microscopy

 

SLICE represents a paradigm shift in delivering cutting-edge light sheet microscopy. This breakthrough system combines high performance with unprecedented affordability and compact design, making cutting-edge light sheet microscopy accessible to labs of all sizes:

 

    • Projected Light Sheet Microscopy (pLSM): Dynamic, modulated light sheets for high-resolution visualization
    • Multi-Resolution Imaging: Adjustable axial resolution from 5 to 50 μm through software-controlled light-sheet thickness
    • Complete Benchtop Solution: Achieve stunning, high-resolution 3D images from a space-saving instrument
    • Scalable and Automated: Deploy multiple SLICE systems with automated sample handling capabilities
    • Under $75,000: Revolutionary price point makes advanced light sheet microscopy accessible

ClearScope® – Advanced Light Sheet Theta Microscopy

 

ClearScope features patented light sheet theta microscopy technology with dual oblique illumination for imaging specimens of nearly any lateral size:

 

    • Theta Microscopy Technology: Two light sheets positioned oblique to specimen and detector axes
    • Large Sample Compatibility: Image specimens from embryos to entire mouse brains up to large primate brain sections
    • Advanced Detection: Up to 7 customizable laser wavelengths and multiple objective lens options
    • Multi-TB Data Handling: Cutting-edge image processing for efficient data compression and analysis

Complete Light Sheet Microscopy Workflow Solutions

 

MBF Bioscience offers a comprehensive end-to-end light sheet microscopy workflow that allows you to analyze your intact sample in full and dive deep into the details:

 

Sample Preparation & Tissue Clearing

 

    • Universal Clearing Compatibility: Compatible with all currently used clearing protocols including CLARITY, iDISCO, CUBIC, SHANEL, and BINAREE

 

    • Intelligent Refractive Index Compensation (IRIC): Automatically adjusts for various clearing protocols to maintain optimal image quality

 

    • Streamlined Protocols: Hassle-free tissue clearing and staining workflows

 

Comprehensive Analysis Software Pipeline

 

Transform your light sheet microscopy data into publication-ready insights with our specialized software suite designed specifically for light sheet applications.

 

Transform your light sheet microscopy data into quantifiable insights with our specialized analysis suite:

 

Neurolucida® 360 - AI-Powered Neuron Reconstruction

Neurolucida 360’s AI-powered tools automatically detect and trace neurons, spines, and vessels in your cleared tissue data, providing the gold standard in neuron reconstruction and analysis for light sheet microscopy applications.

NeuroInfo®- Brain-Wide Analysis

NeuroInfo seamlessly aligns your cleared tissue data with standard brain atlases, automatically identifying key brain regions and quantifying cells or markers within each area. This transforms months of manual analysis into automated workflows that complete in hours.

Stereo Investigator®

Apply proven stereological principles to 3D light sheet datasets, ensuring unbiased quantification of cellular populations and structures throughout your cleared tissue samples.

NeuroDeblur®

Ground-breaking light sheet microscope system for large cleared specimens.

 

 

Light Sheet Microscopy Applications with SLICE Systems

 

Light sheet microscopy with SLICE systems transforms research across three key application areas:

 

Biotech & Drug Discovery Applications

Accelerate pharmaceutical research and drug development with light sheet microscopy systems designed for high-throughput screening and detailed tissue analysis.

 

Drug Discovery Benefits:

 

    • Enhanced Image Quality: Capture stunning detail and uncover hidden structures deep within large, cleared samples, enabling more complete and insightful 3D volumetric analysis.

 

    • Rapid Data Acquisition: Fast imaging speeds enable high-throughput compound screening

 

    • Quantitative Analysis: Integrated analysis tools for morphometry, cell populations, and fluorescence properties

 

    • Scalable Systems: Deploy multiple light sheet microscopy systems for parallel drug screening workflows

Neuroscience Applications

Light sheet microscopy has transformed neuroscience research by enabling comprehensive 3D analysis of neural structures and circuits across entire brain specimens. SLICE systems provide the gentle imaging capabilities essential for preserving delicate neural tissues while capturing unprecedented detail of neuronal architecture.

 

Key Neuroscience Benefits:

 

    • Whole Brain Imaging: Generate 3D images of whole brains in unprecedented detail, facilitating studies on the pathology of Alzheimer's and Parkinson's diseases in mouse models. Light sheet microscopy enables imaging of entire mouse brains down to subcellular resolution.

 

    • Neural Circuit Mapping: Map neural circuits, trace connectivity, and quantify neuronal populations across entire brains. Light sheet microscopy allows researchers to investigate spatial relationships between neural structures and circuits throughout intact brain specimens.

 

    • Neuronal Reconstruction: Image labeled cells and neuronal processes throughout cleared tissue with exceptional clarity. Compatible with neuronal markers including Thy1-eYFP for comprehensive visualization of neural networks.

 

    • Brain-Wide Analysis: Seamlessly align cleared brain tissue data with standard brain atlases using NeuroInfo software, automatically identifying key brain regions and quantifying cells or markers within each area.

 

    • Vascular Network Analysis: Reconstruct and analyze complex cerebrovascular networks in 3D, critical for investigating conditions such as stroke and neurodegeneration. Visualize complete 3D vascular architecture across entire brain specimens.

 

    • Developmental Neuroscience: Track neural development, axonal growth, and synapse formation in real-time using light sheet microscopy's gentle imaging approach that preserves sample viability over extended time periods.

 

    • Disease Pathology Studies: Investigate neurological disorders by analyzing pathological changes in intact brain specimens. Light sheet microscopy enables detailed analysis of disease progression without the artifacts introduced by tissue sectioning.

 

    • Cleared Tissue Compatibility: Effortlessly integrate with existing neuroscience workflows, supporting virtually all popular brain tissue clearing methods like CLARITY, iDISCO, and CUBIC for optimal neural tissue transparency.

 

    • Multi-Scale Resolution: From subcellular structures like dendritic spines to entire brain regions, light sheet microscopy captures neural architecture across multiple scales in a single imaging session.

 

    • Automated Analysis Integration: Purpose-built integration with Neurolucida 360 for AI-powered automatic detection and tracing of neurons, spines, and vessels in cleared brain tissue data.

Cancer Research Applications

Light sheet microscopy has revolutionized cancer research by enabling detailed 3D visualization of tumor architecture and dynamics. SLICE enables researchers to image labeled cells and neuronal processes throughout cleared tissue with exceptional clarity and speed, making it suitable for diverse research applications across neuroscience, developmental biology, cancer research, and beyond.

 

Key Cancer Research Benefits:

 

    • Tumor Organoid Imaging: Cancer Research: Organoids can be used to model different cancer types, facilitating the discovery of new cancer therapies and the study of drug resistance mechanisms. 3D cell cultures are fragile systems that require optimized experimental protocols and low phototoxicity during imaging to preserve samples.

 

    • 3D Tumor Architecture Analysis: Light sheet microscopy captures the complex 3D structure of tumors while preserving tissue integrity, enabling researchers to investigate spatial relationships between structures, cells, and molecules.

 

    • Drug Screening and Development: High-throughput imaging of patient-derived tumor organoids for personalized medicine approaches. Patient-derived tumor organoids (PDTOs) faithfully recapitulate the histological and molecular characteristics of the original tumor.

 

    • Metastasis Studies: Track cancer cell migration and invasion patterns in cleared tissue models. Light sheet microscopy allows visualization of every single cancer metastasis in whole transparent organisms.

 

    • Vascular Analysis: Compatible with commonly used fluorescent proteins and dyes including c-Fos, tdTomato, mCherry, podocalyxin, CD31, and Acta2 for comprehensive tumor vascularization studies.

 

    • Tumor Microenvironment Analysis: Analyze the tumor microenvironment at high resolution, including 3D imaging of invading tumor-infiltrating lymphocytes and localizing CAR T cells in entire organisms.

 

Regenerative Medicine Applications

Light sheet microscopy provides unprecedented insights into tissue regeneration and repair mechanisms through advanced 3D imaging capabilities.

 

Regenerative Medicine Advantages:

 

    • Organoid Development: Organoids and PDTOs represent groundbreaking developments for both researchers and clinicians in various fields, including developmental and cancer biology, regenerative medicine, toxicology, drug development, and precision oncology.

 

    • Stem Cell Tracking: Monitor stem cell differentiation and tissue formation in real-time using light sheet microscopy's gentle imaging approach that minimizes phototoxicity.

 

    • Tissue Engineering: Evaluate scaffold integration and tissue regeneration progress. Since organoids mimic the original tissue architecture in vitro, they represent an excellent model for tissue engineering studies.

 

    • Therapeutic Assessment: Light sheet microscopy enables researchers to assess therapeutic interventions in 3D tissue models, providing insights into regenerative processes at multiple scales.

 

    • Multi-scale Analysis: From cellular to organ-level regenerative processes, light sheet microscopy captures the full spectrum of tissue regeneration dynamics.

 

    • Organ Development Studies: Track organ development and morphogenetic processes in real-time, providing insights crucial for regenerative medicine applications.

 

    • Biobank Applications: Support organoid biobanks that provide drug susceptibility data for research in individualized medicine and regenerative medicine.

Why Choose MBF Bioscience Light Sheet Microscopy Solutions?

 

    • Complete Integrated Systems: Unlike competitors offering standalone instruments, MBF provides complete end-to-end solutions integrating hardware and specialized analysis software

 

    • Unprecedented Value: SLICE systems deliver superior image quality at under $75,000 – a fraction of legacy light sheet microscope costs

 

    • Proven Scientific Impact: Our tools have contributed to over 16,000 peer-reviewed publications, demonstrating real-world research success

 

    • Expert Support: 35+ years of quantitative microscopy expertise with dedicated scientific and technical support teams

 

    • Scalable Solutions: From individual lab benchtop systems to multi-user core facility configurations

 

    • Advanced Analysis Capabilities: Purpose-built software for light sheet data analysis, not generic imaging tools adapted for light sheet applications

 

Getting Started with Light Sheet Microscopy

 

Ready to revolutionize your research with light sheet microscopy? Our team of scientists specializes in helping researchers determine the optimal combination of light sheet imaging systems and analysis software for specific applications.

 

Whether you’re new to light sheet microscopy or looking to upgrade your current imaging capabilities, we provide:

 

    • Consultation on light sheet microscopy system selection
    • Training on light sheet imaging techniques and best practices
    • Comprehensive analysis software packages
    • Ongoing technical support and method development

Contact Our Light Sheet Microscopy Experts

Every research question is unique. Our team of scientists is ready to help you determine the optimal combination of light sheet microscopy tools for your specific needs. Want to explore how light sheet microscopy and tissue clearing could advance your research? Contact us to discuss your specific applications and discover how light sheet microscopy can transform your discoveries.

Transform your biological imaging with state-of-the-art light sheet microscopy systems and analysis software. From benchtop SLICE systems to advanced ClearScope theta microscopes, we provide complete light sheet microscopy solutions for researchers worldwide.