Neurolucida 360 Citations

Neurolucida 360 Citations



377 citations in peer reviewed journals, and counting....

Neurolucida 360 can help you publish your data in high impact journals


Ayata, P., Badimon, A., Strasburger, H. J., Duff, M. K., Montgomery, S. E., Loh, Y.-H. E., . . . Schaefer, A. (2018). Epigenetic regulation of brain region-specific microglia clearance activity. Nature Neuroscience, 21(8), 1049-1060. doi: 10.1038/s41593-018-0192-3.

Baker, C. A., Bolton, M. M., & Parra, A. (2019). Regional Specialization of Pyramidal Neuron Morphology and Physiology in the Tree Shrew Neocortex. Cerebral Cortex. doi: 10.1093/cercor/bhy326.

Baltussen, L. L., Negraes, P. D., Silvestre, M., Claxton, S., Moeskops, M., Christodoulou, E., . . . Ultanir, S. K. (2018). Chemical genetic identification of CDKL5 substrates reveals its role in neuronal microtubule dynamics. [10.15252/embj.201899763]. The EMBO Journal.

Belmer, A., Patkar, O. L., Lanoue, V., & Bartlett, S. E. (2018). 5-HT1A receptor-dependent modulation of emotional and neurogenic deficits elicited by prolonged consumption of alcohol. Scientific Reports, 8(1), 2099. doi: 10.1038/s41598-018-20504-z.

Boros, B. D., Greathouse, K. M., Gearing, M., & Herskowitz, J. H. (2018). Dendritic spine remodeling accompanies Alzheimer’s disease pathology and genetic susceptibility in cognitively normal aging. Neurobiology of Aging. doi:

Boros, B. D., Greathouse, K. M., Gentry, E. G., Curtis, K. A., Birchall, E. L., Gearing, M., & Herskowitz, J. H. (2017). Dendritic spines provide cognitive resilience against Alzheimer's disease. Annals of Neurology, n/a-n/a. doi: 10.1002/ana.25049.

Chaaya, N., Jacques, A., Belmer, A., Richard, D. J., Bartlett, S. E., Battle, A. R., & Johnson, L. R. (2018). Localization of Contextual and Context Removed Auditory Fear Memory within the Basolateral Amygdala Complex. Neuroscience. doi:

Che, A., Babij, R., Iannone, A. F., Fetcho, R. N., Ferrer, M., Liston, C., . . . De Marco García, N. V. (2018). Layer I Interneurons Sharpen Sensory Maps during Neonatal Development. Neuron. doi:

Collins, D. P., Anastasiades, P. G., Marlin, J. J., & Carter, A. G. (2018). Reciprocal Circuits Linking the Prefrontal Cortex with Dorsal and Ventral Thalamic Nuclei. Neuron. doi:

da Silva, M. P., Moraes, D. J. A., Bonagamba, L. G. H., Mecawi, A. d. S., Varanda, W. A., & Machado, B. H. (2019). Hyperexcitability and plasticity induced by sustained hypoxia on rectus abdominis motoneurons. The Journal of Physiology, 0(ja). doi: doi:10.1113/JP277030.

Delatour, L. C., Yeh, P. W., & Yeh, H. H. (2018). Ethanol Exposure In Utero Disrupts Radial Migration and Pyramidal Cell Development in the Somatosensory Cortex. Cerebral Cortex, bhy094-bhy094. doi: 10.1093/cercor/bhy094.

Dickstein, D. L., Dickstein, D. R., Janssen, W. G. M., Hof, P. R., Glaser, J. R., Rodriguez, A., . . . Tappan, S. J. (2016). Automatic Dendritic Spine Quantification from Confocal Data with Neurolucida 360 Current Protocols in Neuroscience: John Wiley & Sons, Inc.

Dickstein, D. L., Talty, R., Bresnahan, E., Varghese, M., Perry, B., Janssen, W. G. M., . . . Limoli, C. L. (2018). Alterations in synaptic density and myelination in response to exposure to high-energy charged particles. Journal of Comparative Neurology, 0(ja). doi: doi:10.1002/cne.24530.

Donega, V., Marcy, G., Lo Giudice, Q., Zweifel, S., Angonin, D., Fiorelli, R., . . . Raineteau, O. (2018). Transcriptional Dysregulation in Postnatal Glutamatergic Progenitors Contributes to Closure of the Cortical Neurogenic Period. Cell Reports, 22(10), 2567-2574. doi:

Gaborieau, E., Hurtado-Chong, A., Fernández, M., Azim, K., & Raineteau, O. (2018). A dual role for the transcription factor Sp8 in postnatal neurogenesis. Scientific Reports, 8(1), 14560. doi: 10.1038/s41598-018-32134-6.

Gennarino, V. A., Palmer, E. E., McDonell, L. M., Wang, L., Adamski, C. J., Koire, A., . . . Zoghbi, H. Y. (2018). A Mild PUM1 Mutation Is Associated with Adult-Onset Ataxia, whereas Haploinsufficiency Causes Developmental Delay and Seizures. Cell, 172(5), 924-936.e911. doi:

Goodliffe, J. W., Song, H., Rubakovic, A., Chang, W., Medalla, M., Weaver, C. M., & Luebke, J. I. (2018). Differential changes to D1 and D2 medium spiny neurons in the 12-month-old Q175+/- mouse model of Huntington’s Disease. PLOS ONE, 13(8), e0200626. doi: 10.1371/journal.pone.0200626.

Helton, T. D., Zhao, M., Farris, S., & Dudek, S. M. (2018). Diversity of dendritic morphology and entorhinal cortex synaptic effectiveness in mouse CA2 pyramidal neurons. Hippocampus, 0(ja). doi: doi:10.1002/hipo.23012.

Hoshiba, Y., Toda, T., Ebisu, H., Wakimoto, M., Yanagi, S., & Kawasaki, H. (2016). Sox11 Balances Dendritic Morphogenesis with Neuronal Migration in the Developing Cerebral Cortex. The Journal of Neuroscience, 36(21), 5775-5784. 

Jacques, A., Chaaya, N., Hettiarachchi, C., Carmody, M.-L., Beecher, K., Belmer, A., . . . Johnson, L. R. (2019). Microtopography of fear memory consolidation and extinction retrieval within prefrontal cortex and amygdala. [journal article]. Psychopharmacology. doi: 10.1007/s00213-018-5068-4.

Kashyap, G., Bapat, D., Das, D., Gowaikar, R., Amritkar, R. E., Rangarajan, G., . . . Ambika, G. (2019). Synapse loss and progress of Alzheimer’s disease -A network model. Scientific Reports, 9(1), 6555. doi: 10.1038/s41598-019-43076-y.

Kiyama, T., Long, Y., Chen, C.-K., Whitaker, C. M., Shay, A., Wu, H., . . . Mao, C.-A. (2019). Essential Roles of Tbr1 in the Formation and Maintenance of the Orientation-Selective J-RGCs and a Group of OFF-Sustained RGCs in Mouse. Cell Reports, 27(3), 900-915.e905. doi:

Kobayashi, C., Okamoto, K., Mochizuki, Y., Urakubo, H., Funayama, K., Ishikawa, T., . . . Ikegaya, Y. (2018). GABAergic inhibition reduces the impact of synaptic excitation on somatic excitation. Neuroscience Research. doi:

Koeppen, J., Nguyen, A. Q., Nikolakopoulou, A. M., Garcia, M., Hanna, S., Woodruff, S., . . . Ethell, I. M. (2018). Functional consequences of synapse remodeling following astrocyte-specific regulation of ephrin-B1 in the adult hippocampus. [10.1523/JNEUROSCI.3618-17.2018]. The Journal of Neuroscience.

Kuddannaya, S., Tong, C. S., Fan, Y., & Zhang, Y. (2018). Geometrically Mediated Topographic Steering of Neurite Behaviors and Network Formation. Advanced Materials Interfaces, 1700819-n/a. doi: 10.1002/admi.201700819.

Lee, D., Hyun, J. H., Jung, K., Hannan, P., & Kwon, H.-B. (2017). A calcium- and light-gated switch to induce gene expression in activated neurons. [Research]. Nat Biotech, advance online publication. doi: 10.1038/nbt.3902

Li, Y., Missig, G., Finger, B. C., Landino, S. M., Alexander, A. J., Mokler, E., . . . Bolshakov, V. Y. (2018). Maternal and Early Postnatal Immune Activation Produce Dissociable Effects on Neurotransmission in mPFC-Amygdala Circuits. [10.1523/JNEUROSCI.3642-17.2018]. The Journal of Neuroscience.

Lu, H.-C., Tan, Q., Rousseaux, M. W. C., Wang, W., Kim, J.-Y., Richman, R., . . . Zoghbi, H. Y. (2017). Disruption of the ATXN1-CIC complex causes a spectrum of neurobehavioral phenotypes in mice and humans. [Article]. Nat Genet, advance online publication. doi: 10.1038/ng.3808

McLaurin, K. A., Li, H., Booze, R. M., Fairchild, A. J., & Mactutus, C. F. (2018). Unraveling Individual Differences In The HIV-1 Transgenic Rat: Therapeutic Efficacy Of Methylphenidate. Scientific Reports, 8(1), 136. doi: 10.1038/s41598-017-18300-2.

McLaurin, K. A., Li, H., Booze, R. M., & Mactutus, C. F. (2019). Disruption of Timing: NeuroHIV Progression in the Post-cART Era. Scientific Reports, 9(1), 827. doi: 10.1038/s41598-018-36822-1.

Michaelson, S. D., Ozkan, E. D., Aceti, M., Maity, S., Llamosas, N., Weldon, M., . . . Rumbaugh, G. (2018). SYNGAP1 heterozygosity disrupts sensory processing by reducing touch-related activity within somatosensory cortex circuits. Nature Neuroscience, 21(12), 1-13. doi: 10.1038/s41593-018-0268-0.

Schmeichel, A. M., Gehrking, J. A., Minota, K., Low, P. A., Singer, W., & Mandrekar, J. N. (2019). Refined Quantitation of Sweat Gland Innervation. doi: 10.1093/jnen/nlz015.

Motley, S. E., Grossman, Y., Janssen, W. G. M., Baxter, M. G., Rapp, P. R., Dumitriu, D., & Morrison, J. H. (2018). Selective loss of thin spines in area 7a of the primate intraparietal sulcus predicts age-related working memory impairment. [10.1523/JNEUROSCI.1234-18.2018]. The Journal of Neuroscience.

Nasrallah, K., Therreau, L., Robert, V., Huang, A. J. Y., McHugh, T. J., Piskorowski, R. A., & Chevaleyre, V. (2019). Routing Hippocampal Information Flow through Parvalbumin Interneuron Plasticity in Area CA2. Cell Reports, 27(1), 86-98.e83. doi:

Nedelescu, H. (2018). Brain architecture at varying scales. Journal of Neuroscience Research, 96(9), 1447-1449. doi: doi:10.1002/jnr.24272.

Nedelescu, H., Abdelhack, M., & Pritchard, A. T. (2018). Regional differences in Purkinje cell morphology in the cerebellar vermis of male mice. Journal of Neuroscience Research, n/a-n/a. doi: 10.1002/jnr.24206.

Nestor, J., Arinuma, Y., Huerta, T. S., Kowal, C., Nasiri, E., Kello, N., . . . Diamond, B. (2018). Lupus antibodies induce behavioral changes mediated by microglia and blocked by ACE inhibitors. [10.1084/jem.20180776]. The Journal of Experimental Medicine.

Noakes, Z., Keefe, F., Tamburini, C., Kelly, C. M., Cruz Santos, M., Dunnett, S. B., . . . Li, M. (2019). Human Pluripotent Stem Cell-Derived Striatal Interneurons: Differentiation and Maturation In Vitro and in the Rat Brain. Stem Cell Reports. doi:

Osipovitch, M., Asenjo Martinez, A., Mariani, J. N., Cornwell, A., Dhaliwal, S., Zou, L., . . . Goldman, S. A. (2018). Human ESC-Derived Chimeric Mouse Models of Huntington’s Disease Reveal Cell-Intrinsic Defects in Glial Progenitor Cell Differentiation. Cell Stem Cell. doi:

Piard, J., Hu, J.-H., Campeau, P. M., Rzońca, S., Van Esch, H., Vincent, E., . . . Worley, P. F. (2017). FRMPD4 mutations cause X-linked intellectual disability and disrupt dendritic spine morphogenesis. Human Molecular Genetics, ddx426-ddx426. doi: 10.1093/hmg/ddx426.

Putatunda, R., Zhang, Y., Li, F., Yang, X.-F., Barbe, M. F., & Hu, W. (2018). Adult neurogenic deficits in HIV-1 Tg26 transgenic mice. [journal article]. Journal of Neuroinflammation, 15(1), 287. doi: 10.1186/s12974-018-1322-2.

Rios-Pilier, J., & Krimm, R. F. (2019). TrkB expression and dependence divides gustatory neurons into three subpopulations. [journal article]. Neural Development, 14(1), 3. doi: 10.1186/s13064-019-0127-z.

Rühling, S., Kramer, F., Schmutz, S., Amor, S., Jiangshan, Z., Schmitz, C., . . . Hochstrasser, T. (2018). Visualization of the Breakdown of the Axonal Transport Machinery: a Comparative Ultrastructural and Immunohistochemical Approach. [journal article]. Molecular Neurobiology. doi: 10.1007/s12035-018-1353-9.

Shahriar, S., Brian, M., Jared, C., Sommer, A., Sami, Z., Julio, G., . . . C., S. J. (2018). Morphometric analysis of astrocytes in brainstem respiratory regions. Journal of Comparative Neurology, 0(ja). doi: doi:10.1002/cne.24472.

Stedehouder, J., Couey, J., Brizee, D., Hosseini, B., Slotman, J., Dirven, C., . . . Kushner, S. (2017). Fast-spiking Parvalbumin Interneurons are Frequently Myelinated in the Cerebral Cortex of Mice and Humans. Cerebral Cortex, 1-13.

Tai, Y., Gallo, N. B., Wang, M., Yu, J.-R., & Van Aelst, L. (2019). Axo-axonic Innervation of Neocortical Pyramidal Neurons by GABAergic Chandelier Cells Requires AnkyrinG-Associated L1CAM. Neuron. doi:

Wang, L., Pang, K., Han, K., Adamski, C. J., Wang, W., He, L., . . . Zoghbi, H. Y. (2019). An autism-linked missense mutation in SHANK3 reveals the modularity of Shank3 function. Molecular Psychiatry. doi: 10.1038/s41380-018-0324-x.

Xiao, X., Djurisic, M., Hoogi, A., Sapp, R. W., Shatz, C. J., & Rubin, D. L. (2018). Automated dendritic spine detection using convolutional neural networks on maximum intensity projected microscopic volumes. Journal of Neuroscience Methods, 309, 25-34. doi:

Zandt, B.-J., Losnegård, A., Hodneland, E., Veruki, M. L., Lundervold, A., & Hartveit, E. (2017). Semi-automatic 3D morphological reconstruction of neurons with densely branching morphology: application to retinal AII amacrine cells imaged with multi-photon excitation microscopy. Journal of Neuroscience Methods. doi: //

Zhang, Y., Du, L., Bai, Y., Han, B., He, C., Gong, L., . . . Yao, H. (2018). CircDYM ameliorates depressive-like behavior by targeting miR-9 to regulate microglial activation via HSP90 ubiquitination. Molecular Psychiatry. doi: 10.1038/s41380-018-0285-0.

Zweifel, S., Buquet, J., Caruso, L., Rousseau, D., & Raineteau, O. (2018). “FlashMap” - A Semi-Automatic Tool for Rapid and Accurate Spatial Analysis of Marker Expression in the Subventricular Zone. Scientific Reports, 8(1), 16086. doi: 10.1038/s41598-018-33939-1.